Maize Transposable Element Database

TE class, sub-class, etc. listing as of 25-Jun-2017

Class Sub-class Order Super-family Family Sub-family
Class ISubclass 1DIRS[RYD] DIRS
[RYN] Ngaro
[RYX] Unknown DIRS
[RYV] VIPER
LINE[RII] I
[RIJ] Jockey
[RIL] L1afeda
cin4
dager
edaej
ejoet
ekeje
etiti
gifife
gugyve
ijij
jikeuf
keneat
koajav
leijoh
loneok
naefe
nubo
nugimu
odoif
ogepy
okor
otiot
oviev
piivi
pyelum
rebaew
totyru
udag
yliij
[RIR] R2
[RIT] RTEcolonist
jare
[RIX] Unknown LINE
LTR[RLB] Bel/Pao
[RLC] Copiaafad
agep
ahov
ajajog
ajipe
ajit
anar
atej
atop
bihar
bote
bovo
debeh
depuw
dijap
doke
dolovu
donuil
dugiab
ebel
ehahu
eninu
erev
fehod
finaij
fipi
fourf
fuvej
gekog
giepum
gilovu
giream
gudyeg
gugu
guvi
guwo
hago
hani
hera
hesa
hiri
homy
hopscotch
huta
huti
ibulaf
ijiret
iseb
janoov
japov
jelat
ji
kake
kuvi
labe
lafa
lusi
machiavelli
mauky
muekeh
naasuj
neha
nene
niki
nitat
nowuv
nuhan
ogiv
omud
onal
opie
owiit
pifo
pute
raider
rely
ruhi
sehoad
seko
seufyt
sofi
stonor
taname
tata
tatu
tiwe
tiwewi
totu
tufe
ubat
ubel
ubep
ugog
uhun
uloh
ulyg
urum
uwaf
victim
vodida
volo
votaed
vuijon
wamenu
waneer
wawo
wiwa
ydut
ypel
yrer
ytar
[RLE] ERV
[RLG] Gypsyabiri
ahoru
aneas
anysaf
apil
awuhe
bavav
bobeg
bobobo
bogu
boha
boja
bomevy
bosohe
bowuow
bygum
cinful-zeon
CRM1
CRM4
dabe
dadeir
dagaf
ekoj
epohi
ewib
ewiut
ewog
fege
flip
fuved
gati
gofi
grande
guhis
guwiot
gylu
gyma
gyte
hooni
huck
hute
ijaat
ikal
ivuk
iwim
jaws
kase
kise
kubi
labu
laiwa
lata
lise
loba
lowy
lute
lyruom
lywy
magellan
maro
moorud
mufeub
mywur
naijaj
nakovu
nasi
nobe
nopip
notu
oguod
ojam
ojav
ojokat
okopam
olepo
omoha
ovamef
oveah
ovikoh
pagof
pebi
piube
prem1
puck
reina
riiryl
rimaar
rowi
rufefu
ruugu
satulo
sawujo
seuwe
soger
sokiit
sowu
suda
sywu
taro
tekay
tituer
tuku
ubid
udav
udokup
ufonah
ugano
ulik
umojev
uper
upus
ures
usif
usuf
uvet
uwew
uwum
uwuw
vufi
waepo
weaniv
weki
wemu
witi
wuwe
wyly
xilon-diguus
yfages
ytub
yvoj
ywuv
ywyt
[RLR] Retrovirus
[RLX] Unknown LTRadun
afeke
afuv
ajeb
alaw
anim
arar
avahi
baha
baso
bawigu
beboso
beby
bene
beva
biwa
bori
bosovu
bs1
buire
bula
bumy
CRM2
CRM3
dady
daju
dala
defub
demo
doba
efaw
eguh
elalal
emuh
epiil
epom
etin
etug
ewigyw
ewot
ewuof
fajy
fanuab
fara
fate
fosu
gate
geta
gotur
guafa
guali
gufa
habu
halo
hiimam
hoda
hutu
ifab
ilofaw
ilyl
iwik
jakek
jeli
joemon
jube
jupek
juta
kahoba
kahowu
kaise
kawivo
kinosi
kupu
lamyab
lenu
leso
loukuv
luteja
lyna
mafigi
mafogo
mako
maono
mewu
mibaab
mijuw
milt
miva
mopin
mulaf
muusi
nabu
naiba
nakuuv
name
nana
naseup
neafu
neteut
nisow
niypo
nyjuvy
odip
ohag
ojah
okoj
okur
onub
osed
ovev
oviil
oviis
ovys
oweiw
owume
panen
petopi
pibo
poarow
pope
raga
rijuep
ruda
rulo
ruwi
saahol
sari
sego
sela
sido
small
soefes
teki
teuta
tisy
tojena
toro
tuteh
tywo
ubow
ugymos
ujinas
ukov
ulon
uluil
urogor
utar
uvis
uwub
vafim
vaofen
vedi
vegu
vora
vufe
vuna
vusu
wawu
wihov
wiolus
wiru
wugaab
wuywu
yemi
yraj
yreud
ywely
PLE[RPP] Penelope
[RPX] Unknown PLE
SINE[RSS] 5S
[RSL] 7SL
[RST] tRNAAU
ZmSINE1
ZmSINE2.1
ZmSINE2.2
ZmSINE2.3
ZmSINE3
[RSX] Unknown SINE
Unknown retrotransposon[RXX] Unknown retrotransposon
Class IISubclass 1Crypton[DYC] Crypton
[DYX] Unknown Crypton
TIR[DTC] CACTA
[DTA] hAT
[DTE] Merlin
[DTM] MutatorZm00030
Zm00118
Zm00197
Zm00257
Zm00266
Zm00268
Zm00299
Zm00346
Zm00364
Zm00460
Zm00473
Zm00555
Zm00614
Zm00628
Zm00665
Zm00673
Zm00743
Zm00754
Zm00796
Zm00800
Zm00850
Zm00851
Zm00884
Zm01310
Zm01468
Zm01472
Zm01654
Zm01980
Zm02039
Zm02066
Zm02084
Zm02117
Zm02275
Zm02569
Zm02656
Zm02661
Zm02703
Zm02731
Zm02785
Zm02947
Zm03238
Zm03556
Zm03723
Zm03788
Zm04488
Zm04817
Zm05382
Zm05901
Zm05916
Zm06094
Zm06136
Zm06396
Zm06455
Zm06456
Zm06948
Zm07209
Zm08014
Zm08178
Zm08412
Zm08670
Zm08959
Zm09546
Zm09664
Zm09941
Zm10163
Zm10271
Zm10339
Zm10582IC
Zm10723
Zm11868
Zm12110
Zm12576
Zm12720
Zm13526
Zm13585
Zm14108
Zm14377
Zm14961
Zm15241
Zm15648
Zm15816
Zm16884
Zm17123
Zm17242
Zm17860
Zm17880
Zm18028
Zm18059
Zm18165
Zm18873
Zm19358
Zm19831
Zm19950
Zm20218
Zm20301
Zm20615
Zm21089
Zm21197
Zm21757
Zm22986
Zm23554
Zm25163
Zm25481IC
Zm25996
Zm26908
Zm27731
Zm27984
Zm28013
Zm28681
Zm29517
Zm30706
Zm31138
Zm32353
Zm32512
Zm33202
Zm33203
Zm33205
Zm33206
Zm33207
Zm33208
Zm33209
Zm33210IC
Zm33211
Zm33212
Zm33213
Zm33216
Zm33220
Zm33221
Zm33222
Zm33223
Zm33224
Zm33225IC
Zm33226
Zm33227IC
Zm33228
Zm33229
Zm33233
Zm33234
[DTP] P
[DTH] PIF/Harbinger
[DTB] PiggyBac
[DTT] Tc1/Mariner
[DTR] Transib
[DTX] Unknown TIR
Unknown DNA transposon[DXX] Unknown DNA transposon
Subclass 2Helitron[DHH] HelitronHip1
Hip2
Hip5
Hip6
Hip7
[DHX] Unknown Helitron
Maverick[DMM] Maverick
[DMX] Unknown Maverick